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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4314618 chr8:10816772 A/G SGK223 chr8:8175258-8244008:- 0.44 8.69 5.82E-17 Box Plot
THCA rs4315497 chr11:49214499 G/A FOLH1B chr11:89372395-89431886:+ 0.37 6.47 2.45E-10 Box Plot
THCA rs4316067 chr7:33081514 A/G FKBP9L chr7:55748767-55780945:- 0.39 7.94 1.5E-14 Box Plot
THCA rs4320511 chr8:10870605 A/G SGK223 chr8:8175258-8244008:- -0.4 -7.41 5.74E-13 Box Plot
THCA rs4322421 chr11:77459394 C/T INTS4L1 chr7:64601603-64694600:+ 0.61 9.94 2.8E-21 Box Plot
THCA rs4326350 chr8:10763655 C/G SGK223 chr8:8175258-8244008:- -0.35 -6.94 1.28E-11 Box Plot
THCA rs4329955 chr17:36439266 C/T TBC1D3B chr17:34493061-34503996:- -0.49 -7.45 4.4E-13 Box Plot
THCA rs4331911 chr5:45859375 T/G LOC647121 chr1:121260910-121313686:+ 0.37 7.79 4.09E-14 Box Plot
THCA rs4333549 chr8:10979561 C/G SGK223 chr8:8175258-8244008:- 0.51 9.89 4.26E-21 Box Plot
THCA rs4338000 chr7:33093389 A/G FKBP9L chr7:55748767-55780945:- 0.4 9.07 2.99E-18 Box Plot
THCA rs4340921 chr5:49687697 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.87 2.43E-14 Box Plot
THCA rs4343916 chr6:26522675 A/T ZNF322B chr9:99957633-99961910:- 0.58 10.89 8.15E-25 Box Plot
THCA rs4344516 chr11:77438059 A/G INTS4L1 chr7:64601603-64694600:+ 0.61 9.86 5.33E-21 Box Plot
THCA rs4346769 chr5:18514453 C/T WDR44 chrX:117480036-117583924:+ -0.17 -6.06 2.78E-9 Box Plot
THCA rs434889 chr21:18945475 C/A CXADRP3 chr18:14477954-14499277:- 0.59 8.03 7.78E-15 Box Plot